HIV-1 Envelope Subregion Length Variation during Disease Progression	M. E. Curlin, R. Zioni, Y. Liu, et al. (submitted)
A Persistant Reservoir of HIV-1 in Pulmonary Macrophages	G. S. Laco, D. Nickle, A. J. Melvin, et al. (submitted)
HIV-1 variation before seroconversion in men who have sex with men: Analysis of acute/early HIV infection in the Multicenter AIDS Cohort Study.	G. S. Gottlieb, L. Heath, D. C. Nickle et al. Journal of Infectious Diseases 197: (in press) 2008
HIV-1 group M conserved elements vaccine.	Rolland, M., D. C. Nickle, and J. I. Mullins. PLoS Pathogens 3: e157 2007
Extensive Intrasubtype Recombination in South African Human Immunodeficiency Virus Type 1 Subtype C Infections	Rousseau, C. M., G. H. Learn, T. Bhattacharya, et al. Journal of Virology 81: 4492-4500 2007
A Reliable Phenotype Predictor for Human Immunodeficiency Virus Type 1 Subtype C Based on Envelope V3 Sequences.	Jensen, M. A., M. Coetzer, A. B. van 't Wout, et al. Journal of Virology 80: 4698-4704 2006
Human Immunodeficiency Virus Type 1 env Evolves toward Ancestral States upon Transmission to a New Host	J. T. Herbeck, D. C. Nickle, G. H. Learn, et al. Journal of Virology 80:1637-1644 2006
Human Immunodeficiency Virus Type 1 Subtype B Ancestral Envelope Protein Is Functional and Elicits Neutralizing Antibodies in Rabbits Similar to Those Elicited by a Circulating Subtype B Envelope	N. A. Doria-Rose, G. H. Learn, A. G. Rodrigo, et al. Journal of Virology 79:11214-11224 2005
Low-level Viremias During HAART Result from Two Processes	N. H. Tobin, G. H. Learn, S. E. Holte, et al. Journal of Virology 79:9625-9634 2005
Dual HIV-1 Infection Associated with Rapid Disease Progression	G. S. Gottlieb, D. C. Nickle, M. A. Jensen, et al. The Lancet 363:619-622 2004
Improved Coreceptor Usage Prediction and Genotypic Monitoring of R5-to-X4 Transition by Motif Analysis of HIV-1 env V3 Loop Sequences	M. A. Jensen, F.-S. Li, A. B. van 't Wout, et al. Journal of Virology 77(24): 13376-13388 2003
Predicting Demographic Group Structures Based on DNA Sequence Data	J. P. Anderson, G. H. Learn, A. G. Rodrigo, et al. Molecular Biology and Evolution 20(7): 1168-1180 2003
Potency of HAART Affects Viral Replication and the Efficacy of Human Immunodeficiency Virus Type 1 Therapy and Can be Assessed by Human Immunodeficiency Virus Type 1 DNA levels in PBMC	L. M. Frenkel, Y. Wang, G. H. Learn, et al. Journal of Virology 77(10): 5721-5730 2003
Cellular Gene Expression upon Human Immunodeficiency Virus Type 1 Infection of CD4+-T-Cell Lines	A. B. van 't Wout, G. K. Lehrman, S. A. Mikeeva, et al. Journal of Virology 77(2): 1392-1402 2003
Consistent Viral Evolutionary Changes Associated with the Progression of Human Immunodeficiency Virus Type 1 Infection	R. Shankarappa, J. B. Margolick, S. J. Gange, et al. Journal of Virology 73(12): 10489-10502 1999
Genetic Evaluation of Suspected Cases of Transient HIV-1 Infection of Infants.	L. M. Frenkel, J. I. Mullins, G. H. Learn, et al., Science 280: 1073-1077 1998