Mullins Molecular Retrovirology Lab tag:mullinslab.microbiol.washington.edu,2008-10-02://3 2009-01-15T21:25:20Z Movable Type 4.21-en Lam, Airin tag:mullinslab.microbiol.washington.edu,2009://3.229 2009-01-15T21:20:25Z 2009-01-15T21:25:20Z Airin LamUndergraduate Studentairinlam@u... Brandon Maust http://staff.washington.edu/bmaust mullion_blank.png
Airin Lam
Undergraduate Student

airinlam@u
]]> Gottlieb 2009 CID tag:mullinslab.microbiol.washington.edu,2009://3.228 2009-01-15T18:05:21Z 2009-01-19T01:34:42Z Gottlieb GS, Badiane NMD, Hawes SE, Fortes L, Toure M, Ndour CT, Starling AK, Traore F, Sall F, Wong KG, CherneSL, AndersonDJ, Dye SA, Smith RA, Mullins JI, Kiviat NB, Sow PS, for the University of Washington-Dakar HIV-2 Study... Brandon Maust http://staff.washington.edu/bmaust Gottlieb GS, Badiane NMD, Hawes SE, Fortes L, Toure M, Ndour CT, Starling AK, Traore F, Sall F, Wong KG, CherneSL, AndersonDJ, Dye SA, Smith RA, Mullins JI, Kiviat NB, Sow PS, for the University of Washington-Dakar HIV-2 Study Group 2009 Emergence of Multiclass Drug-Resistance in HIV-2 in Antiretroviral-Treated Individuals in Senegal: Implications for HIV-2 Treatment in Resouce-Limited West Africa. Clinical Infectious Diseases482009 Jan 1 Epub ahead of print pubmed]]> Supplemental Figures Analysis of polymorphic amino acids sites in RT and PR was performed using InSites (http://indra.mullins.microbiol.washington.edu/cgi-bin/InSites/index.cgi). HIV-2 RT and PR consensus, HIV-2 ROD, and patients are shown. Polymorphic amino acid sites, their protein position, and their respective changes from the consensus are shown in columns. Unique (private) changes are shown in the right hand column.
  • Supplemental Figure 1
  • Supplemental Figure 2
    • ]]> Carlson 2008 tag:mullinslab.microbiol.washington.edu,2008://3.226 2008-11-24T20:43:28Z 2008-11-24T20:48:26Z Carlson JM, Brumme ZL, Rousseau CM, Brumme CJ, Matthews P, Kadie C, Mullins JI, Walker BD, Harrigan PR, Goulder PJ, Heckerman D 2008 Phylogenetic Dependency Networks: Inferring Patterns of CTL Escape and Codon Covariation in HIV-1 Gag. PLoS Comput Biol411e1000225... Brandon Maust http://staff.washington.edu/bmaust Carlson JM, Brumme ZL, Rousseau CM, Brumme CJ, Matthews P, Kadie C, Mullins JI, Walker BD, Harrigan PR, Goulder PJ, Heckerman D 2008 Phylogenetic Dependency Networks: Inferring Patterns of CTL Escape and Codon Covariation in HIV-1 Gag. PLoS Comput Biol411e1000225 pubmed]]> rousseau_2008_2 tag:mullinslab.microbiol.washington.edu,2008://3.224 2008-11-07T21:44:20Z 2008-11-07T21:53:04Z Rousseau C, Lockhart D, Listgarten J, Kadie C, Learn G, Maley S, Nickle D, Heckerman D, Deng W, Brander C, Ndung'u T, Coovadia H, Goulder P, Korber B, Walker B, Mullins J 2008 Rare HLA Drive Additional HIV Evolution Compared... Brandon Maust http://staff.washington.edu/bmaust Rousseau C, Lockhart D, Listgarten J, Kadie C, Learn G, Maley S, Nickle D, Heckerman D, Deng W, Brander C, Ndung'u T, Coovadia H, Goulder P, Korber B, Walker B, Mullins J 2008 Rare HLA Drive Additional HIV Evolution Compared to More Frequent Alleles AIDS Research and Human Retroviruses In press.]]>
  • Nef.txt
  • finalWGset060518_2.env.txt
  • finalWGset060518_2.gag.txt
  • finalWGset060518_2.pol.txt
  • finalWGset060721_rev.txt
  • finalWGset060721_tat.txt
  • finalWGset060721_vif.phy_phyml_best_tree1
  • finalWGset060721_vpr.txt
  • finalWGset060721_vpu.phy_phyml_tree.txt
]]> Kim, Moon tag:10.30.1.209,2008:/~brandon/mullins//1.32 2008-10-07T20:24:00Z 2008-10-07T20:26:20Z Moon KimUndergraduate Studentmoonk87@u... Mullins Admin mullion_blank.png
Moon Kim
Undergraduate Student

moonk87@u
]]> Lu, Paul tag:10.30.1.209,2008:/~brandon/mullins//1.31 2008-10-07T20:19:08Z 2008-11-25T00:00:07Z Paul LuUndergraduate Studentaznpaul@u... Mullins Admin aznpaul.jpg
Paul Lu
Undergraduate Student

aznpaul@u


]]> Penna, Megan tag:10.30.1.209,2008:/~brandon/mullins//1.30 2008-10-07T20:15:38Z 2008-10-07T20:17:56Z Megan PennaUndergraduate Studentmpenna@u... Mullins Admin mullion_blank.png
Megan Penna
Undergraduate Student

mpenna@u
]]> Rolland, Morgane tag:10.30.1.209,2008:/~brandon/mullins//1.29 2008-10-06T22:28:38Z 2008-10-29T21:00:03Z Morgane Rolland Postdoctoral Fellow mrolland@u 206 732-6162... Mullins Admin mrolland.jpgMorgane Rolland
Postdoctoral Fellow

mrolland@u
206 732-6162

]]> Manocheewa, Siriphan tag:10.30.1.209,2008:/~brandon/mullins//1.27 2008-10-06T22:25:02Z 2008-10-06T22:26:26Z Siriphan Manocheewa Graduate Student maocs@u 206 732-6144... Mullins Admin mullion_blank.pngSiriphan Manocheewa
Graduate Student

maocs@u
206 732-6144]]> Maley, Steve tag:10.30.1.209,2008:/~brandon/mullins//1.26 2008-10-06T22:22:18Z 2008-10-06T22:23:07Z Steve Maley Graduate Student maleys@u 206 732-6077... Mullins Admin mullion_blank.pngSteve Maley
Graduate Student

maleys@u
206 732-6077]]> Herbeck, Josh tag:10.30.1.209,2008:/~brandon/mullins//1.25 2008-10-06T22:16:36Z 2008-10-29T22:44:34Z Joshua Herbeck Postdoctoral Fellow herbeck@u 206 732-6149website... Mullins Admin mullion_blank.pngJoshua Herbeck
Postdoctoral Fellow

herbeck@u
206 732-6149

]]> Zhao, Hong tag:10.30.1.209,2008:/~brandon/mullins//1.24 2008-10-06T21:58:15Z 2008-10-06T22:06:55Z Hong ZhaoResearch Scientisthzhao@u206 732-6144... Mullins Admin mullion_blank.pngHong Zhao
Research Scientist

hzhao@u
206 732-6144

]]> Wong, Kim tag:10.30.1.209,2008:/~brandon/mullins//1.23 2008-10-06T21:55:42Z 2008-10-06T21:57:24Z Kim WongResearch Scientistkwong@u206 732-6144... Mullins Admin mullion_blank.pngKim Wong
Research Scientist

kwong@u
206 732-6144

]]> Swain, Vic tag:10.30.1.209,2008:/~brandon/mullins//1.22 2008-10-06T21:45:14Z 2008-10-06T21:54:16Z Vic SwainResearch Scientistvicswain@u206 732-6078... Mullins Admin vicswain.jpgVic Swain
Research Scientist

vicswain@u
206 732-6078

]]> Stoddard, Jill tag:10.30.1.209,2008:/~brandon/mullins//1.21 2008-10-06T21:39:24Z 2008-10-07T20:36:34Z Jill StoddardResearch Consultantjstod@u206 732-6149... Mullins Admin jstod.jpgJill Stoddard
Research Consultant

jstod@u
206 732-6149
]]>