HIRIS aims to provide a stable, authoritative, and standardized source of data for analysing HIV-1 integration sites from the viral reservoir. It seeks to support analyses using the tools of your choice, whether that’s R and ggplot or Excel and Prism.
The data contained within comes from a variety of published sources curated by the Mullins Lab from studies of HIV-1 site selection in vivo in patients on suppressive ART and from in vitro models of latency. The database itself is regularly and automatically regenerated from our primary and secondary sources in order to incorporate changes and additions.
If you’d like to see your HIV-1 integration site data included, please email us.
A few other curated datasets of viral integration sites exist. You may find that some of them better fit your needs.
See an expanded version of this plot on the Top Genes page.
|Rank||Gene||# of Subjects||Unique IS||Total IS|