Isolation of Chromosomal DNA from Mammalian Cells
A. Reagents:
Lysis buffer:
0.45% Tween, 0.45% NP40, 2.5 mM MgCl2, 50 mM KCl, 10 mM Tris-Cl pH8.3, 100 µg/µl, Proteinase K
Tween20 | 225 µl |
NP40 | 225 µl |
1 M MgCl2 | 125 µl |
1 M KCl | 2.5ml |
1 M Tris-Cl pH 8.3 | 0.5ml |
20 µg/ml Prot K | 250 µl* |
dH2O | 46.2 ml |
* Add Proteinase K just before use, 5 µl stock per ml of lysis buffer used.
A. Protocol:
Wash cells with cold PBS.
Resuspend at 10,000 cells/µl in lysis buffer.
Incubate at 56°C for 1 hour.
Boil for 10 minutes.
Store lysate at -20°C
B. Reagents:
L6 buffer:
0.08 M GuSCN (LifeTechnologies GibcoBRL), 0.08 M Tris-Cl pH 6.4, 0.035 M EDTA, 2% (wt/vol) Triton X-100
B. Protocol*:
Wash cells with cold PBS
Resuspend at 106 cells/ml in L6 buffer.
Add an equal volume of Isopropanol.
Spin at 14000 rpm for 30 minutes at 4°C.
Discard supernatant.
Wash pellet twice with 75% Ethanol.
Airdry pellet.
Resuspend pellet in 100 µl dH2O. Store at -20 °C.
* Adapted from Boom et al. J.Clin.Microbiol. 1991, 28:495-503.