HIV-1 HMA Subtyping Kit             James I. Mullins


The positioning of the HMA primers on an alignment of multiple subtypes can be seen in an alignment figure.

For those who wish to analyze the data, multiple-sequence alignments of the kit's HIV-1 subtype reference sequences can be obtained here in several file formats:

Note that half the HMA primers were reversed and complemented to match the strand orientation of the alignment.  These primers are indicated within their sequence names.

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